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Title |
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PyDeT, a PyMOL plug-in for visualizing geometric concepts around proteins
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Authors |
Rafael Ordog1, *
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Affiliation |
1Department of Computer Science, Eotvos University, Pázmány Péter stny. 1/C, H-1118, Budapest, Hungary
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devillmeister@gmail.com; * Corresponding author
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Article Type |
Software
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Date |
received April 09, 2008; revised April 24, 2008; accepted May 05, 2008; published May 27, 2008
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Abstract |
The fast growing Protein Data Bank (PDB) contains a vast amount of 3-dimensional data on proteins, and nucleic-acid structures obtained by X-ray crystallography and Nuclear Magnetic Resonance (NMR) spectroscopy. PyDeT is a PyMOL (molecular visualization software system) plug-in that visualize tessellations derived from the protein structure along with the source protein. PyDeT is released under a GNU General Public License (GPL) and is available from the authors.
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Keywords |
proteins; nucleic acids; structures; visualization; plug-in
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Citation |
Ordog, Bioinformation 2(8): 346-347 (2008)
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Edited by |
P. Kangueane
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ISSN |
0973-2063
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Publisher |
Biomedical Informatics Publishing Group
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Copyright |
Publisher
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Copyright Transfer Agreement |
The authors of published articles in Bioinformation automatically transfer the copyright to the publisher upon formal acceptance. However, the authors reserve right to use the information contained in the article for non commercial purposes.
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License |
This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited.
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