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Title

 

 

 

 

 

FAIR: A server for internal sequence repeats

 

Authors

Ramaswamy Senthilkumar, Radhakrishnan Sabarinathan, Bazil Shaahul Hameed, Nirjhar Banerjee, Narayanan Chidambarathanu, Rajadurai Karthik, Kanagaraj Sekar*

 

Affiliation

 

Structural Biology and Bio-computing, Indian Institute of Science, Bangalore 560 012, India

 

Email

 

sekar@physics.iisc.ernet.in

Article Type

 

Web Server

 

Date

 

Received October 14, 2009; Revised November 16, 2009; Accepted November 16, 2009; Published January 07, 2010

 

Abstract

An Internet computing server has been developed to identify all the occurrences of the internal sequence repeats in a protein and DNA sequences. Further, an option is provided for the users to check the occurrence(s) of the resultant sequence repeats in the other sequence and structure (Protein Data Bank) databases. The databases deployed in the proposed computing engine are up-to-date and thus the users will get the latest information available in the respective databases. The server is freely accessible over the World Wide Web (WWW).

 

Keywords

internal repeats, sequence, server, DNA, protein

 

Availability

http://bioserver1.physics.iisc.ernet.in/fair/

 

Citation

 

Senthilkumar et al., Bioinformation 4(7): 271-275 (2010)

 

Edited by

 

P. Kangueane

 

ISSN

 

0973-2063

 

Publisher

 

Biomedical Informatics

 

Copyright

 

Publisher

 

Copyright Transfer Agreement

 

The authors of published articles in Bioinformation automatically transfer the copyright to the publisher upon formal acceptance. However, the authors reserve right to use the information contained in the article for non commercial purposes.

 

License

 

 

This is an open-access article, which permits unrestricted use, distribution, and reproduction in any medium, for non-commercial purposes, provided the original author and source are credited.